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    Research Newsletter | Fall 2023

    Announcements

    Increase the Visibility of Your Research

    Offered by the Leonard Davis Institute of Health Economics (LDI), Amplify@LDI: Translating Research for Impact, is a free, asynchronous online instruction module focusing on key tools and skills in translation and dissemination for researchers. The course is free and open to the public after registration. This course does not have a cohort or live instructor component. You can start the course immediately after registration.

    About the Course

    For many health policy and health economics researchers, it can be difficult to convert research into a form that can be understood and used by the public and policymakers. As a result, research evidence and results may never make it into practice and policy.

    Translation and dissemination tackle these hurdles by making results more accessible. This free, online course focuses on key tools and skills in translation and dissemination for researchers, including social media, op-eds, blogs and briefs, media engagement, and policymaker engagement.

    What You’ll Learn

    The to help you impact decisions made by elected officials, government agencies, non-government organizations, and health systems that affect the health of populations. You’ll gain a solid foundation of skills for effectively translating and disseminating research.


    Join Penn Vet’s Artificial Intelligence Interest Group

    Drs. Fuyu Guan and Darko Stefanovski have started a school-wide Artificial Intelligence Interest Group. If you are interested in joining the group, please contact Dr. Guan.


    Free Professional Headshots in the Career Services Self-Service Photo Booth

    Students, postdocs, alumni, faculty, and staff are all invited to use the Professional Photo Booth in Career Services. Open during normal Career Services business hours (Monday-Friday, 9:00 a.m.—5:00 p.m.), the booth is a self-serve experience. Career Services is located in the basement level (suite 20) of the McNeil Building at 3718 Locust Walk.

    Use of the booth is on a first-come, first-served basis. Groups of ten or more interested in booking a block of time for their class/student group/office/etc should fill out the Request Collaboration form and select “Photo Booth Event,” and Career Services will do its best to accommodate the request.

    Read More


    New Research, Interests, and Activities (RIA) System

    In July 2023, the University launched the new Research, Interests, and Activities (RIA) reporting tool. 

    For training and support resources, including a link to the new system, please navigate to the Research Portal: https://portal.research.upenn.edu/conflict-of-interest/ 

    Please reach out to support@research.upenn.edu with any questions.


    New NSF RCR Training Requirement for Faculty and Senior Personnel

    The National Science Foundation has instituted a new requirement for Responsible and Ethical Conduct of Research that will apply to faculty and senior personnel on proposals submitted on or after July 31, 2023. This training requirement does NOT replace existing NSF Responsible Conduct of Research training requirements currently applicable to students and trainees. 

    The University of Pennsylvania has implemented a short online training module for faculty and senior personnel impacted by the new requirement that should take just a few minutes to complete. The training is available through Workday Learning, and learners may register by clicking the button below. 

    Register for Training

    Presently, the completion of this training is a one-time requirement. The Office of Research Services is asking faculty and key personnel to complete the training within six months of receiving a notice of award for an applicable NSF grant (or sooner). If training has not been completed by the end of the first year of the applicable NSF award, a new funding segment will not be issued until training is complete.

    Please reach out to Missy Peloso (epeloso@upenn.edu) with any questions regarding this requirement.


    Contemplating Research Reproducibility: Awareness of Personnel Influences on Animals

    F. Claire Hankenson, MS, DVM, DACLAM, Associate Vice Provost for Research and Executive Director of University Laboratory Animal Resources (ULAR), has authored an article (below) on gentle handling techiques and their importance for research reproducibility. For information and refresher courses on animal handling and manipulations, please contact the ULAR Scientist Training staff at ular-tr@pobox.upenn.edu. This resource team can also provide specialized training on aspects of injections and blood collection methods, micro-tattooing, rodent identification, catheterization, anesthesia, aseptic technique, and surgical practices, as well as humane refinements in handling procedures.

    One of the most common interactions with research animal species is between animal handler and animal at times of cage change, experimental manipulation, and physical examination. It is well established that these types of interactions, while necessary, are also a source of stress for the animals.1 For example, active transfer of mice into a cage leads to a higher increase in plasma corticosterone levels compared to passive transfer without handling; similarly, rats react differently depending on cage-change techniques.2,3 Approaches to and training for animal handling can impact animal welfare, data outcomes, and may contribute to unexplained variation in research findings and reproducibility in certain mouse strains and between sexes.4 The standard method of grasping the tail to restrain and move mice continues to be routinely used, despite evidence that it induces stress5, therefore, it is recommended that less aversive, non-aversive, and low-stress handling methods be incorporated into animal research practices.

    Gentle handling of laboratory mice has been demonstrated to positively affect rodent behavior as well as interactions with experimenters.6-8 Use of inanimate objects to transfer rodents between cages and surfaces (e.g., tunnel handling) or gentle scooping and lifting of mice with palms of hands (a.k.a., cupping) without direct physical restraint offer refinements in handling methods that can reduce anxiety-like behaviors and improve the welfare.5 Challenges to implementation of tunnel handling have identified concerns about time and cost investments.9 Improved welfare using non-aversive handling was demonstrated through modest increases in pup production and reduction of litter losses, indicating associated reductions in stress as well as substantial benefits to breeding operations with only a minor increase in investment of time to manipulate animals without tail-lifting or use of forceps.10 Video tutorials on gentle handling techniques are available online through the advocacy organization NC3Rs which aids the global research community in aspects of reduction, refinement, and replacement alternatives: https://www.nc3rs.org.uk/mouse-handling-video-tutorial.

    Establishing positive interactions with rats is best accomplished in younger pups or newly acquired young animals by manual ‘tickling’ to habituate animals to human interactions prior to assignment to experimental treatments. During this acclimation period, caretakers may expose rats to a series of events that simulate rough-and-tumble play by young rat pups.11 Tickling has been demonstrated to efficiently and practicably reduce rats’ fearfulness of humans and improve animal welfare through reliably modeling positive affective states.8

    Specific pathologic effects of routine manipulations and handling are typically undocumented, or scientists may be unaware of lesions associated with common manipulations of laboratory mice that require restraint, such as injections, blood sampling, and tumor monitoring. Assenmacher et al. conducted a postmortem assessment of 1,000 mice used in research with 864 animals being heavily manipulated and 136 being handled only for routine husbandry procedures. For those animals with extensive manipulation, this was defined as necessary and repetitive physical restraint, or due to routine injections and manipulations throughout experiments. Osteoarticular lesions were found in ~7% (61 mice) of heavily manipulated mice, and in a single unmanipulated mouse, demonstrating a highly significant association between heavy handling of mice and the presence of traumatic lesions.12

    Manual grasping of laboratory mice with restraint devices (e.g., forceps), while historically deemed to be of benefit from a biosecurity perspective, very likely leads to subclinical lesions in mice, up to and including bony fractures, soft tissue injury, and potential for unrecognized and untreated pain and distress, which can confound experimental outcomes. The University of Pennsylvania and University Laboratory Animal Resources (ULAR) removed handling forceps from animal facilities in December 2021 in favor of gentle manual restraint. Training of animal handlers in refined and gentle techniques for experimental mice is critical to improved animal welfare and research outcomes and has been cited as the primary area for welfare improvements based upon a survey of laboratory animal veterinarians.12,13

    Aside from handling methods, it has been shown that male-associated olfactory stimuli induce a stress response in laboratory mice and rats, leading to blunted indicators of pain behavior and increased indicators of anxiety.14,15 The effect of male personnel on rodents was replicated with olfactory exposure to shirts worn by men, bedding from intact and unfamiliar male mammals, and presentation of human cell secretions (e.g., armpit sweat) from men.14 Mice demonstrate a preference for the scent of female personnel and an increased stress susceptibility when handled by male personnel.16

    The presence of observers has been shown to inhibit the expression of normal behavior in rabbits, by causing a reduction in activity levels and the duration of exploration behavior.17 This finding was duplicated in a study of rabbits under observation following surgery, in that the presence of an observer inhibited pain response post-operatively, with rabbits hiding some pain signs related to the affected area.18 Overall, the ability of research animals to differentiate the sex of human experimenters can have measurable effects on behavioral and/or biological responses. The presence of familiar personnel, with whom animals have interacted positively, has been shown to alleviate anxiety-like behaviors and increase consistency in results from animal tests.19

    In animal research, the personnel that interact with research animals (e.g., animal care staff, veterinary professionals, and research team members) will consistently change throughout the experimental and resting/housing periods until end of study. An improved understanding of these influences of handlers on animal responses will be critical to consider in terms of research findings and general interpretations related to reproducibility in biomedical models of human disease.

    *** For further information and refresher courses on animal handling and manipulations, please contact the ULAR Scientist Training staff at ular-tr@pobox.upenn.edu. This resource team can also provide specialized training on aspects of injections and blood collection methods, micro-tattooing, rodent identification, catheterization, anesthesia, aseptic technique, and surgical practices, as well as humane refinements in handling procedures.

    1. Balcombe JP, Barnard ND, Sandusky C. Laboratory routines cause animal stress. Contemp Top Lab Anim Sci. 2004;43(6):42-51.

    2. Rasmussen S, Miller MM, Filipski SB, Tolwani RJ. Cage change influences serum corticosterone and anxiety-like behaviors in the mouse. J Am Assoc Lab Anim Sci. 2011;50(4):479-483.

    3. Meller A, Kasanen I, Ruksenas O, et al. Refining cage change routines: comparison of cardiovascular responses to three different ways of cage change in rats. Lab Anim. 2011;45(3):167-173.

    4. Novak J, Jaric I, Rosso M, Rufener R, Touma C, Würbel H. Handling method affects measures of anxiety, but not chronic stress in mice. Sci Rep. 2022;12(1):20938.

    5. Henderson LJ, Dani B, Serrano EMN, Smulders TV, Roughan JV. Benefits of tunnel handling persist after repeated restraint, injection and anaesthesia. Sci Rep. 2020;10(1):14562.

    6. Gouveia K, Hurst JL. Reducing mouse anxiety during handling: effect of experience with handling tunnels. PLoS One. 2013;8(6):e66401.

    7. Nakamura Y, Suzuki K. Tunnel use facilitates handling of ICR mice and decreases experimental variation. J Vet Med Sci. 2018;80(6):886-892.

    8. Cloutier S, LaFollette MR, Gaskill BN, Panksepp J, Newberry RC. Tickling, a Technique for Inducing Positive Affect When Handling Rats. J Vis Exp. 2018(135).

    9. Henderson LJ, Smulders TV, Roughan JV. Identifying obstacles preventing the uptake of tunnel handling methods for laboratory mice: An international thematic survey. PLoS One. 2020;15(4):e0231454.

    10. Hull MA, Reynolds PS, Nunamaker EA. Effects of non-aversive versus tail-lift handling on breeding productivity in a C57BL/6J mouse colony. PLoS One. 2022;17(1):e0263192.

    11. LaFollette MR, O’Haire ME, Cloutier S, Blankenberger WB, Gaskill BN. Rat tickling: A systematic review of applications, outcomes, and moderators. PLoS One. 2017;12(4):e0175320.

    12. Assenmacher CA, Lanza M, Tarrant JC, Gardiner KL, Blankemeyer E, Radaelli E. Post Mortem Study on the Effects of Routine Handling and Manipulation of Laboratory Mice. Animals (Basel). 2022;12(23).

    13. Marx JO, Jacobsen KO, Petervary NA, Casebolt DB. A Survey of Laboratory Animal Veterinarians Regarding Mouse Welfare in Biomedical Research. J Am Assoc Lab Anim Sci. 2021;60(2):139-145.

    14. Sorge RE, Martin LJ, Isbester KA, et al. Olfactory exposure to males, including men, causes stress and related analgesia in rodents. Nat Methods. 2014;11(6):629-632.

    15. Bateson M. Of (stressed) mice and men. Nat Methods. 2014;11(6):623-624.

    16. Georgiou P, Zanos P, Mou TM, et al. Experimenters’ sex modulates mouse behaviors and neural responses to ketamine via corticotropin releasing factor. Nat Neurosci. 2022;25(9):1191-1200.

    17. Pinho RH, Leach MC, Minto BW, Rocha FDL, Luna SPL. Postoperative pain behaviours in rabbits following orthopaedic surgery and effect of observer presence. PLoS One. 2020;15(10):e0240605.

    18. Pinho RH, Justo AA, Cima DS, et al. Effects of Human Observer Presence on Pain Assessment Using Facial Expressions in Rabbits. J Am Assoc Lab Anim Sci. 2023;62(1):81-86.

    19. van Driel KS, Talling JC. Familiarity increases consistency in animal tests. Behav Brain Res. 2005;159(2):243-245.

    FEATURED ARTICLE

    Getting to Know Dr. Louise Moncla

    Louise H. Moncla, PhD, is an assistant professor in the Department of Pathobiology who started her lab in September 2022. Dr. Moncla performed her undergraduate studies at Penn State University, where she received bachelor’s degrees in biology and music (trumpet performance). During her undergraduate research, Dr. Moncla worked with Dr. Beth Shapiro to study polar bear evolution. While classified as distinct species, polar bears and brown bears increasingly interact due to climate change and receding sea ice, and opportunistically mate to produce fertile offspring (dubbed “grolars” or “pizzlies”). Some evidence suggests that polar bears and brown bears may have intermixed during ancient periods of deglaciation, providing a mechanism by which polar bear diversity could be maintained during climate stress. During her undergraduate research, Dr. Moncla isolated and sequenced nuclear genes from polar bears and brown bears sampled near Alaska and built phylogenetic trees to infer the evolutionary relationship between these two species. This experience introduced Dr. Moncla to research and led her to pursue a PhD in microbiology.

    Dr. Moncla completed a PhD at the University of Wisconsin-Madison under the mentorship of Dr. Thomas Friedrich. Her PhD work focused on developing methods for generating and analyzing next-generation sequencing data to understand viral within-host diversity and the ways that transmission bottlenecks influence viral evolution. RNA viruses have short generation times, large population sizes, and high mutation rates, allowing them to rapidly diversify within individual, infected hosts. Dr. Moncla and her colleagues pioneered early work showing that antigenic variants may arise during seasonal influenza infections but fail to become fixed. In a separate study that traced the evolution of an avian influenza virus as it adapted to mammals, Dr. Moncla discovered that selection on the receptor binding protein was critical for avian influenza virus replication and transmission and that transmission bottlenecks may propagate host-adapting mutations. This work resulted in an Institut Pasteur Young Investigator Award, launching a collaborative project to characterize how avian influenza viruses evolve within naturally infected humans and domestic birds in Cambodia.

    Carrying this project into her postdoc with Dr. Trevor Bedford (Fred Hutchinson Cancer Center), Dr. Moncla worked to combine within-host diversity metrics with new analytic approaches from phylogenetics to understand how viruses evolve and transmit across host groups. By characterizing how highly pathogenic avian influenza viruses evolve during natural infections, she showed that these viruses generate human-adapting mutations during natural spillover infections, but that these mutations stayed at low frequencies within-host and were absent from many human infections (Moncla et al, PLOS Pathogens, 2020). Together, these results showed that our understanding of the genetic factors that drive human infection is poorly understood. To fill these gaps in knowledge, Dr. Moncla developed a public visualization of global avian influenza virus evolution and circulation built on the Nextstrain platform and hosted on Nextstrain.org/flu/avian. Dr. Moncla curated ~20,000 genomes sampled globally from 1996 to the present, from a broad range of host species, and developed additional visualizations that show pathogenicity determinants, genetic classifications, and epidemiologically relevant metadata. Dr. Moncla updates this website monthly to provide real-time data on global avian influenza evolution and transmission patterns, which has been particularly useful during the ongoing avian influenza outbreak in North America. Dr. Moncla plans to continue developing new features for this website in her new lab.

    With this resource and dataset in place, and funding from a Life Sciences Research Foundation postdoctoral fellowship and a K99/R00 Pathway to Independence Award, Dr. Moncla began working on the genetic and ecological factors that drive avian influenza cross-species transmission. Avian influenza viruses naturally circulate in wild, migratory birds, but can become endemic in domestic bird populations, where they facilitate sporadic human infections. When humans are infected with these viruses, case fatality rates can be as high as 60%. In 2021, these viruses were introduced into North America, sparking an uncontrolled outbreak in which hundreds of thousands of wild birds have died, nearly 60 million domestic birds have been culled, and mammals have been infected (foxes, stone martens, mink, seals, sea lion, and three humans) at an unprecedented rate. These developments highlight the need to better understand the factors driving transmission and how to evaluate the risk these viruses pose to humans. Towards this end, the Moncla lab is now working to develop novel, genomic approaches to identify mutations that enhance the likelihood of mammal infection, which can then be phenotypically validated in the lab. This work could allow us to better understand the risk that currently circulating viruses pose to humans. Others in the group are leading work to use novel phylogenetic models to reconstruct how these viruses have evolved historically, and the role that distinct classes of birds have played in driving transmission. By partnering with Drs. Lisa Murphy and Eman Anis in the Avian Diagnostic Laboratory at New Bolton Center, the Moncla lab is now sampling and sequencing viruses from positive birds and mammals in Pennsylvania to reconstruct transmission patterns locally and nationally. These studies are critical for designing surveillance and outbreak response strategies, and for prioritizing populations to target for vaccination.

    In addition to her work on avian influenza, Dr. Moncla is also broadly interested in using viral genomics to reconstruct viral outbreaks. In 2019, through a collaborative project with the Colombian NIH, she showed that the Zika virus epidemic in Colombia was sparked by multiple introductions, but sustained primarily by within-country transmission, suggesting that improved surveillance and mosquito control should be prioritized over border closures (Black and Moncla et al., BMC Infectious Diseases, 2019). Following the start of the SARS-CoV-2 pandemic, Dr. Moncla led a study of 133 acutely infected individuals in Wisconsin to show that novel variants generated during infection are rarely transmitted onward, either within the broader community or among members of the same household (Braun et al., PLOS Pathogens, 2021). These findings suggest that short infection times and narrow transmission bottlenecks limit the selection and propagation of novel mutations, which may slow the evolution of new traits like immune escape.

    Finally, in 2020, Dr. Moncla partnered with the Washington State Department of Health to investigate an unusual mumps outbreak in Washington State. By employing a novel synthesis of detailed epidemiologic data, feedback from community health advocates, and new phylogenetic methods, she found that a person’s social network can be the primary risk factor for respiratory virus infection and transmission, even when a vaccine is effective and widely used (Moncla et al., eLife, 2021). These findings highlight that addressing economic and health disparities will remain important, even in a setting with high vaccine availability and use, with clear implications for SARS-CoV-2 mitigation strategies. In her new lab, Dr. Moncla is now expanding on these findings through a CDC contract that aims to investigate how a person’s geographic setting (urban vs. rural), immune history (vaccination and infection histories), and access to health resources, impact SARS-CoV-2 infection and transmission patterns. Quantifying the contribution of these factors to infection risk is important for evaluating vaccination efforts (like where to prioritize clinic sites) and designing new public health policies.

    Latest Research

    Highlighted News

    Dipti Pitta with a cow.

    Could we breed cows that emit less methane? (link is external)

    In a new study, researchers from the School of Veterinary Medicine identified attributes of low-methane-emitting dairy cows that could be used as targets for selective breeding.

    Social ecology and community work in the Galápagos (link is external)

    Daniel Beiting, PhD, associate director of the Institute for Infectious and Zoonotic Diseases, expanded his work this summer in the Galápagos, giving Stephanie Sila, V’25, an ideal opportunity to gain…

    Thirty (30) Penn Vet students enrolled in the NIH/BI Summer Research Program this year, culminating in a trip to Puerto Rico for the 2023 Veterinary Scholars Symposium.

    Fully immersing first and second-year veterinary students into all aspects of biomedical research, the program offers the distinct opportunity to work alongside dynamic mentors of their choosing from across the 700 biomedical research laboratories on the University of Pennsylvania campus.

    At the end of the summer, students presented their findings at the Scholars Symposium, a gathering of more than 700 students from the United States and beyond.

    Kara Brown, VMD, DACVSMR, is an Assistant Professor of Equine Sports Medicine and Rehabilitation in the Department of Clinical Studies—New Bolton Center. After completing her veterinary degree at the University of Pennsylvania in 2014, she went on to complete two large animal rotating internships, one at Woodside Equine Clinic in Ashland, VA, and the other at the University of Pennsylvania, New Bolton Center. She then completed a fellowship in Large Animal Cardiology and Ultrasound, and a residency in Equine Sports Medicine and Rehabilitation, also at New Bolton Center, during which time she additionally received specialty training in equine rehabilitation through the Animal Rehabilitation Institute. She became a diplomate of the American College of Veterinary Sports Medicine and Rehabilitation in 2021.  She remained at New Bolton Center for three years as a Lecturer in Equine Sports Medicine prior to beginning her faculty appointment. Her clinical and research interests include the diagnosis and treatment of poor performance in equine athletes, axial skeletal pain in horses, and evidence-based rehabilitation strategies.


    Emmelyn Hsieh, DVM, DACVIM (SAIM), is an Assistant Professor of Medicine in the Department of Clinical Sciences and Advanced Medicine. She obtained her DVM in 2018 from the University of California, Davis, then undertook a small animal rotating internship at the University of Minnesota. She then moved back to the University of California, Davis to complete a small animal internal medicine residency followed by a clinical infectious disease fellowship. Her research interests include infectious diseases, specifically antimicrobial stewardship and resistance and tracking antimicrobial use within various hospital settings. She also has an interest in lower urinary tract diseases.


    Alicia Long, DVM, DACVIM (LA), DACVECCS, is an Assistant Professor of Large Animal Emergency and Critical Care in the Department of Clinical Studies—New Bolton Center. She received her veterinary degree in 2012 from the Virginia Maryland College of Veterinary Medicine in Blacksburg, Virginia. She then completed a rotating internship in equine medicine, surgery, anesthesia, and ambulatory practice at Rhinebeck Equine, LLC in Rhinebeck New York, followed by a second internship in a combined program with the Tufts University Cummings School of Veterinary Medicine as a large animal medicine intern and the Massachusetts Equine Clinic as an equine ambulatory intern. After this Dr. Long came to the University of Pennsylvania’s New Bolton Center for a residency in large animal internal medicine, followed by a fellowship in large animal emergency and critical care. After this time, she was hired on as an Assistant Professor of Large Animal Emergency and Critical Care. Her research interests focus on the equine intestinal microbiome and its relationship to equine colic, particularly recurrent colic.


    Wojciech K. Panek, DVM, DACVM, is an Assistant Professor of Neurology and Neurosurgery in the Department of Clinical Sciences and Advanced Medicine. He graduated from Wroclaw University of Environmental and Life Sciences, Poland. Following rotating and surgical internships, he completed a 2-year neuro-oncology fellowship at NU, Feinberg School of Medicine in the Department of Neurology/Neurosurgery, Chicago, IL. He then went on to complete a 2-year fellowship focusing on neuro-aging in companion dogs at NC State University, followed by a 3-year neurology and neurosurgery residency program at UC Davis. His research includes translational neuro-oncology and neuro-aging and primarily focuses on developing a comprehensive understanding of the regulatory signals that govern the immune system mobilization and/or exhaustion in patients suffering from CNS tumors and canine cognitive dysfunction.

    Honors & Achievements

    Dr. Christopher J. Lengner Named Chair of the Department of Biomedical Sciences 

    Christopher J. Lengner, PhD, was appointed Chair of the Department of Biomedical Sciences and promoted to full professor effective July 1, 2023. Dr. Lengner is the Harriet Ellison Woodward Professor.

    A graduate of the Worcester Polytechnic Institute, Lengner received his PhD from the University of Massachusetts Medical School, and then went on to become a Ruth Kirschstein Post-Doctoral Fellow at the Whitehead Institute at MIT in the lab of Rudolf Jaenisch. As a postdoc, he made seminal contributions to the field of epigenetic reprogramming in the generation of induced pluripotent stem cells—knowledge that is now broadly applied in disease modeling and the development of cell-based therapies.

    Read More


    Drs. Klaus Hopster and Holly Stewart Appointed to Endowed Professorships

    Klaus Hopster, DVM, PhD, has been appointed the Marilyn M. Simpson Associate Professor of Large Animal Anesthesia, and Holly Stewart, VMD, PhD, has been appointed the Charles W. Raker Assistant Professor of Equine Orthopedic Surgery. 

    The Marilyn M. Simpson Professorships are awarded to outstanding faculty members at the School of Veterinary Medicine whose work is dedicated to equine medicine, and the Charles W. Raker Professorship is intended for a faculty member at the School of Veterinary Medicine engaged in orthopedic research, clinical service, and mentoring. This professorship is designated for exceptional, early-career faculty.

    The awarding of a named professorship is the highest honor bestowed upon faculty at the University of Pennsylvania. Endowed professorships reflect excellence in scholarly achievement, clinical excellence, mentorship, and service. 

    Read More


    Two Early-Career Scientists, Drs. Andrew Modzelewski and Kotaro Sasaki, Recognized for Advancing Biomedical Research

    Two early-career scientists from the Department of Biomedical Sciences have been honored with awards from the Kinship Foundation, Arnold & Mabel Beckman Foundation, and the Endocrine Society.

    Andrew Modzelewski, PhD, assistant professor of molecular biology, has been named a 2023 Searle Scholar. The $300,000 individual award supports the research of promising young faculty in the biomedical sciences who have recently been appointed as assistant professors on the tenure track. Dr. Modzelewski is recognized for his research investigating the role of retrotransposons in preimplantation development, reproduction, and disease progression.

    Modzelewski has also been named a 2023 Beckman Young Investigator Awardee. He will receive $600,000 in funding over four years. Founded in 1977 by scientific instrumentation pioneer Dr. Arnold O. Beckman, the Arnold and Mabel Beckman Foundation supports young scientists whose creative, interdisciplinary research will lead to innovations and new tools and methods for scientific discovery.

    Kotaro Sasaki, MD, PhD, assistant professor of biomedical sciences, has received the Endocrine Society’s 2023 Early Investigator Award. The Early Investigator Awards support early-career scientists in endocrine-related research. Dr. Sasaki’s research explores the molecular basis of human infertility, reproduction, and endocrinology. 

    Read More


    Dr. Raimon Duran-Struuck Named Fellow of the American Society of Transplantation

    Raimon Duran-Struuck, DVM, PhD, was named a Fellow of the American Society of Transplantation (FAST). The FAST designation recognizes those members who have demonstrated both an exceptional commitment to the field of transplantation, as well as outstanding service to the American Society of Transplantation.


    Dr. Anna Kashina Named Fellow of the American Society for Cell Biology

    Anna Kashina, PhD, was named a Fellow of the American Society for Cell Biology (ASCB). Election as a Fellow of ASCB is an honor bestowed upon ASCB members by their peers. Fellows are recognized for their meritorious efforts to advance cell biology and/or its applications, and for their service to the Society. ASCB Fellows are scientists who have had a significant and sustained impact on one of the mission areas of ASCB: advancing scientific discovery, advocating sound research policies, improving education, promoting professional development, or increasing diversity in the scientific workforce.


    Select Publications and Grants

    Read the latest scholarly publication and grant information from Penn Vet researchers.

    Buriko Y, Chalifoux NV, Clarkin-Breslin R, and Silverstein DC. Comparison of a viscoelastic point-of-care coagulation monitor with thromboelastography in sick dogs with hemostatic abnormalities. Vet Clin Pathol 2023;52:217-227. 
     
    Chen T, Wang Q, Wang Y, Dou Z, Yu X, Feng H, Wang M, Zhang Y, and Yin J. Using fresh vegetable waste from Chinese traditional wet markets as animal feed: Material feasibility and utilization potential. Sci Total Environ 2023;902:166105. 
     
    Guan F, Fay S, Adreance MA, McGoldrick LK, Proctor RM, Missanelli JR, You Y, and Robinson MA. Automated identification of unknown doping agents in confiscation samples by flow-injection mass spectrometry and mass spectral library searches. Drug Test Anal 2023;15:779-786. 
     
    Guan F, You Y, Fay S, Adreance MA, McGoldrick LK, and Robinson MA. Factors affecting untargeted detection of doping agents in biological samples. Talanta 2023;258:124446. 
     
    Jimenez KA, Ferguson DR, and Hankenson FC. Evaluation of Rodent Diet Stability when Stored in Conditions that Diverge from Guide Parameters. J Am Assoc Lab Anim Sci 2023;62:375-381. 
     
    Kim HT and Wakshlag JJ. Nutrition and Theriogenology: A Glimpse Into Nutrition and Nutritional Supplementation During Gestation, Lactation, Weaning and Breeding Dogs and Cats. Vet Clin North Am Small Anim Pract 2023;53:1083-1098. 
     
    Pollock TY, Vazquez Marrero VR, Brodsky IE, and Shin S. TNF licenses macrophages to undergo rapid caspase-1, -11, and -8-mediated cell death that restricts Legionella pneumophila infection. PLoS Pathog 2023;19:e1010767. 
     
    Radaelli E, Assenmacher CA, Verrelle J, Banerjee E, Manero F, Khiati S, Girona A, Lopez-Lluch G, Navas P, and Spinazzi M. Mitochondrial defects caused by PARL deficiency lead to arrested spermatogenesis and ferroptosis. Elife 2023;12. 
     
    Roxon CA, Linton JK, Habecker PL, Castaneda C, Raudsepp T, and Sertich PL. Equine dystocia complicated by fetal congenital anomaly. J Am Vet Med Assoc 2023:1-4. 
     
    Shepley-McTaggart A, Liang J, Ding Y, Djurkovic MA, Kriachun V, Shtanko O, Sunyer O, and Harty RN. Contrasting effects of filamin A and B proteins in modulating filovirus entry. PLoS Pathog 2023;19:e1011595. 
     
    Stepanchenko N, Stefenoni H, Hennessy M, Nagaraju I, Wasson DE, Cueva SF, Raisanen SE, Dechow CD, Pitta DW, and Hristov AN. Microbial composition, rumen fermentation parameters, enteric methane emissions, and lactational performance of phenotypically high and low methane-emitting dairy cows. J Dairy Sci 2023;106:6146-6170.
     
    Takahashi K, Kwok JC, Sato Y, Aguirre GD, and Miyadera K. Extended functional rescue following AAV gene therapy in a canine model of LRIT3-congenital stationary night blindness. Vision Res 2023;209:108260. 
     
    Takahashi K, Kwok JC, Sato Y, Aguirre GD, and Miyadera K. Molecular characterization of MAP9 in the photoreceptor sensory cilia as a modifier in canine RPGRIP1-associated cone-rod dystrophy. Front Cell Neurosci 2023;17:1226603. 
     
    Wang X, Dou Z, Feng S, Zhang Y, Ma L, Zou C, Bai Z, Lakshmanan P, Shi X, and Liu D. Global food nutrients analysis reveals alarming gaps and daunting challenges. Nature Food 2023:1-11. 
     
    Wei M, Flowers L, Knight SAB, Zheng Q, Murga-Garrido S, Uberoi A, Pan JT, Walsh J, Schroeder E, Chu EW, Campbell A, Shin D, Bradley CW, Duran-Struuck R, and Grice EA. Harnessing diversity and antagonism within the pig skin microbiota to identify novel mediators of colonization resistance to methicillin-resistant Staphylococcus aureus. mSphere 2023;8:e0017723. 
     
    Xiao Z, Todd L, Huang L, Noguera-Ortega E, Lu Z, Huang L, Kopp M, Li Y, Pattada N, Zhong W, Guo W, Scholler J, Liousia M, Assenmacher CA, June CH, Albelda SM, and Pure E. Desmoplastic stroma restricts T cell extravasation and mediates immune exclusion and immunosuppression in solid tumors. Nat Commun 2023;14:5110. 
     
    Zhang J, Brodsky IE, and Shin S. Yersinia Type III-Secreted Effectors Evade the Caspase-4 Inflammasome in Human Cells. bioRxiv 2023.

    Jorge I. Alvarez
    Cincinnati Children’s Hospital Medical Center 
    Binding of Epstein Barr Virus EBNA2 unifies multiple sclerosis genetic mechanisms
    4/15/23—3/31/28
    $192,440 

    Montserrat C. Anguera
    I3H
    Role for X-Chromosome Inactivation in female-biased enhancement of immune responses to influenza
    7/1/23—6/30/24
    $100,000 

    Montserrat C. Anguera
    NIH
    Role for nuclear matrix proteins and DNA methylation for XCI maintenance in female lymphocytes
    7/1/23—6/30/28
    $370,000 

    Michael L. Atchison
    NIH
    VMD-PhD training in infectious disease-related research
    7/1/22—6/30/23
    $237,812 

    Matthew J. Atherton
    Penn Vet Cancer Center
    PVCC Pilot
    1/1/24—12/31/25
    $75,000 

    Stephen D. Cole
    State of Minnesota 
    People, pets and plasmids: A One Health pathogenomic training fellowship to investigate carbapenemase-producing organisms from companion animals
    4/01/23—3/31/24
    $26,035 

    Stephen D. Cole
    FDA 
    Companion animal and animal food diagnostic sample analysis in support of FDA Vet-LIRN activities and investigation
    6/01/21—5/31/24
    $90,000 

    Stephen D. Cole 
    FDA 
    Implementation and evaluation of two SARS-CoV-2 assays for companion animal testing to expand Vet-LIRN COVID-19 capacity
    9/1/23—8/31/24
    $25,000 

    Raimon Duran-Struuck
    Asher Bio
    SRA-CAR-IL2
    7/4/21—7/4/24
    $150,827 

    Maureen Griffin
    PetDx
    The utility of OncoK9 liquid biopsy for detection of canine insulinoma
    6/26/23—6/26/28
    $5,000.00 

    Ronald N. Harty
    Fox Chase/NIH 
    Development of host-oriented therapeutics targeting severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
    8/01/23—7/31/24
    $172,308 

    De’Broski Herbert
    NIH 
    Neuronal regulation of sinonasal type 2 inflammation
    7/01/23—6/30/25
    $275,000 

    Anna Kashina
    USDA
    Fecal metagenomic and metabolomic biomarkers as tools for chronic wasting disease
    9/30/23—9/29/24
    $227,274 

    Christopher J. Lengner
    DOD/CHOP  
    Validation of novel drivers of juvenile polyposis syndrome
    9/1/23—8/31/27
    $311,254 

    Christopher J. Lengner
    Columbia/NIH
    The basis for and function of enteroendocrine lineage plasticity in the intestinal DNA damage response
    4/12/23—3/31/28
    $54,400 

    Nicola J. Mason
    V Foundation—Ethos
    S0W 2—Unraveling mechanisms of resistance to checkpoint inhibition in canine urothelial carcinoma
    7/27/23—7/27/25
    $242,150 

    Nicola J. Mason
    NIH
    Advancing the coordinating center for the canine cancer immunotherapy network
    9/1/22—8/31/27
    $285,688 

    Nicola J. Mason
    NIH
    Advancing allogeneic CAR-iNKT for the treatment of solid tumors through comparative oncology
    9/1/22—8/31/27
    $354,244 

    Nicola J. Mason
    Sebastian Strong Foundation
    B7-H3 redirected allogeneic CAR-iNKT cell therapy for the treatment of pediatric patients with osteosarcoma
    9/1/23—8/31/26
    $190,419 

    Andrew J. Modzelewski
    Beckman Foundation
    Leveraging the phenomenon of retrotransposon reactivation in development to improve human health and treat disease
    9/1/23—8/31/27
    $150,000 

    Andrew J. Modzelewski
    Searle Foundation
    From parasites to symbiotes: Leveraging retrotransposon reactivation signatures in development to better understand disease
    7/1/23—6/30/26
    $300,000 

    Lisa A. Murphy
    Department of Agriculture
    Regional veterinary workforce development to enhance early recognition of newly-detected, re-emerging, and foreign animal diseases
    6/1/2023—5/31/2025
    $95,932 

    Cynthia Otto
    Commonwealth of Pennsylvania
    Comprehensive wildlife health program for the state of Pennsylvania
    7/1/2023—6/30/2024
    $191,285 

    Ellen Puré
    Capstan Therapeutics
    Capstan Therapeutics sponsored research agreement year 2
    9/11/23—6/30/24
    $245,437 

    Kotaro Sasaki
    NIH
    Stem cell-based models for elucidating human adrenocortical development and dysfunction
    8/18/23—7/31/28
    $319,440

    P. Jeremy Wang
    NIH
    Epigenetic control of spermatogonial stem cell self-renewal
    6/5/23—3/31/28
    $1,275,078 

    John H. Wolfe
    CTSA/PICAB
    Institutional clinical and translational science award
    6/01/23—5/31/24
    $27,999